Protein: P98175 | MoonDB v2.0

UniprotKB AC	UniprotKB ID	Gene name	Full name	Species	Curated set
P98175 (Uniprot)	RBM10_HUMAN	RBM10	RNA-binding protein 10	human	No

Protein Function

Uniprot: May be involved in post-transcriptional processing, most probably in mRNA splicing. Binds to RNA homopolymers, with a preference for poly(G) and poly(U) and little for poly(A) (By similarity). May bind to specific miRNA hairpins (PubMed:28431233).

MoonDB Dissimilar Functions

Showing 1 to 1 of 1 entries

Search:

GO ID 1	Function 1	Module ID 1	GO ID 2	Function 2	Module ID 2	Association Probability (PrOnto)	Interaction Probability (PrOnto)
GO:0006396	RNA processing	426	GO:0036211	protein modification process	440, 555	5.60e-03	3.14e-16

Previous1Next

MoonDB Network Modules

Biological Processes

Showing 1 to 10 of 36 entries

Search:

Module ID (MoonGO)	GO ID (BP)	GO Name
31	GO:0034645	cellular macromolecule biosynthetic process
31	GO:0044271	cellular nitrogen compound biosynthetic process
31	GO:0090304	nucleic acid metabolic process
31	GO:0010468	regulation of gene expression
167	GO:0016070	RNA metabolic process
167	GO:0010467	gene expression
167	GO:0060255	regulation of macromolecule metabolic process
191	GO:0006355	regulation of transcription, DNA-templated
353	GO:0000398	mRNA splicing, via spliceosome
426	GO:0008380	RNA splicing

Previous1 2 3 4Next

Cellular Components

Showing 1 to 10 of 14 entries

Search:

Module ID (MoonGO)	GO ID (CC)	GO Name
31	GO:0005634	nucleus
167	GO:0005654	nucleoplasm
191	GO:0031981	nuclear lumen
353	GO:0005654	nucleoplasm
426	GO:0005654	nucleoplasm
440	GO:0005829	cytosol
440	GO:0005634	nucleus
440	GO:0005886	plasma membrane
440	GO:0031982	vesicle
458	GO:0005634	nucleus

Previous1 2Next

Protein GO Annotations

Biological Processes

Showing 1 to 5 of 5 entries

Search:

GO ID (BP)	GO Name	Evidence Code (GO EC)
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IEA
GO:0006397	mRNA processing	IEA
GO:0008150	biological_process	ND
GO:0008380	RNA splicing	IEA
GO:0042981	regulation of apoptotic process	IEA

Previous1Next

Cellular Components

Showing 1 to 2 of 2 entries

Search:

GO ID (CC)	GO Name	Evidence Code (GO EC)
GO:0005634	nucleus	IDA
GO:0016607	nuclear speck	IDA

Previous1Next

Dissimilar Cellular Components (PrOnto)

No pairs of PrOnto dissimilar CC GO terms found.

All Protein Interactions

Showing 1 to 10 of 42 entries

Search:

Interactor	Also a MoonDB EMF protein
AES_HUMAN	Yes: Q08117 (MoonDB)
ATN1_HUMAN	No
BAHD1_HUMAN	No
BEND7_HUMAN	No
CCAR1_HUMAN	No
CEP70_HUMAN	No
CPSF7_HUMAN	No
CSK21_HUMAN	Yes: P68400 (MoonDB)
DDX17_HUMAN	No
DDX5_HUMAN	No

Previous1 2 3 4 5Next

Publications Associated

Showing 1 to 10 of 25 entries

Search:

PMID	Article Title
8590280	Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1.
8808293	A novel gene, DXS8237E, lies within 20 kb upstream of UBE1 in Xp11.23 and has a different X inactivation status.
12176931	Large-scale proteomic analysis of the human spliceosome.
14702039	Complete sequencing and characterization of 21,243 full-length human cDNAs.
15489334	The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
15772651	The DNA sequence of the human X chromosome.
16959974	The consensus coding sequences of human breast and colorectal cancers.
17081983	Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
17525332	ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
17707232	A histone H2A deubiquitinase complex coordinating histone acetylation and H1 dissociation in transcriptional regulation.

Previous1 2 3Next

OMIM Diseases Associated

Showing 1 to 1 of 1 entries

Search:

OMIM ID	Disease Name
311900	TARP syndrome

Previous1Next

Protein Domains Associated

Showing 1 to 10 of 25 entries

Search:

Domain Name	Domain ID	Source
G-patch	PF01585	Pfam
G_PATCH	PS50174	PROSITE
G_patch	SM00443	SMART
G_patch_dom	IPR000467	InterPro
OCRE_RBM10	cd16167	CDD
PTHR13948:SF4	PTHR13948:SF4	PANTHER
RBD_domain_sf	IPR035979	InterPro
RBM10	IPR033095	InterPro
RBM10_OCRE	IPR035618	InterPro
RBM10_RRM2	IPR034992	InterPro

Previous1 2 3Next